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Search results for: LIPIS PROFILE
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IFI16 Impacts Metabolic Reprogramming during Human Cytomegalovirus Infection
PublicationCellular lipid metabolism plays a pivotal role in human cytomegalovirus (HCMV) infection, as increased lipogenesis in HCMV-infected cells favors the envelopment of newly synthesized viral particles. As all cells are equipped with restriction factors (RFs) able to exert a protective effect against invading pathogens, we asked whether a similar defense mechanism would also be in place to preserve the metabolic compartment from HCMV...
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Projektowanie okrętów I - profil MSiJ
e-Learning CoursesKurs w ramach zajęć projektowych z przedmiotu Projektowanie Okrętów I
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Configurational and Conformational Preferences in Stereoselective Acylations of N-Methyl-1,3-diaminopropane with Acyl Chlorides
PublicationEvidence for a stereoinduction profile of the reaction of N-methyl-1,3-diaminopropane with acyl chlorides was provided. A possibility to engage in intramol. CH2···HN and Cl···H-N interactions and the proton migration process to the methylamino group leads to the E secondary amides carrying the N···H+···N or N-H···N bridges, that show unusual spectroscopic images. Empirical relations between the ΔδC chem. shift differences,...
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Patrycja Puzdrowska dr inż.
PeopleW październiku 2005 r. – rozpoczęcie nauki na Wydziale Mechanicznym Politechniki Gdańskiej, kierunek Mechanika i Budowa Maszyn, studia stacjonarne, jednolite magisterskie. W lipcu 2010 r. – ukończenie studiów o specjalności Urządzenia i Systemy Chłodnicze i Klimatyzacyjne, uzyskanie tytułu magistra inżyniera. W 2012 r. – rozpoczęcie studiów III stopnia w Środowiskowym Studium Doktoranckim, na Wydziale Oceanotechniki i Okrętownictwa,...
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Escherichia coli K-12 suppressor-free mutants lacking early glycosyltransferases and late acyltransferases. Minimal lipopolysaccharide structure and induction of envelope stress response.
PublicationTo elucidate the minimal lipopolysaccharide (LPS) structure needed for the viability of Escherichia coli, suppressor-free strains lacking either the 3-deoxy-d-manno-oct-2-ulosonic acid transferase waaA gene or derivatives of the heptosyltransferase I waaC deletion with lack of one or all late acyltransferases (lpxL/M/P) and/or various outer membrane biogenesis factors were constructed. Δ(waaC lpxL lpxM lpxP) and waaA mutants exhibited...
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Jakub Szulwic dr inż.
PeopleJakub Szulwic (born 23 December 1974 in Bydgoszcz, Poland) – is an experienced, licensed Land Surveyor, specialized in construction monitoring by the use of photogrammetric methods and laser scanning technology. His specialization are geomatics and geoinformatics. He is an author about 100 publications including 50 indexed in Web of Science (H-index = 15) In 1993, He graduated from Secondary School in Tuchola, Poland on physics...
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Approaches to Static Digestion Models
PublicationIt is not possible to look in detail at the wide range of static digestion methods that have been used to date. However, this section looks at some of the general approaches that have been used to look at the digestion of various nutrients and bioactives. I have focussed on the two main nutrients that undergo digestion in the upper GI tract, namely protein and lipid. In the case of protein, the research has largely been driven...
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Piotr Waszczur dr inż.
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How do sterols determine the antufungal activitiy of amphotericin B? Free energy of binding between the drug and its membrane targets.
PublicationAmphotericin B (AmB) is a well-known polyene antibiotic used to treat systemic fungal infections. It is commonly accepted that the presence of sterols in the membrane is essential for the AmB biological activity, that is, for the formation of transmembrane ion channels. The selective toxicity of AmB for fungal cells is attributed to the fact that it is more potent against fungal cell membranes containing ergosterol than against...
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Thermodynamics aspects of interactions between acridine derivatives and DNA
PublicationDNA is a molecular target for many anticancer and antiviral drugs. Therefore, a clear understanding of the interaction of small molecules with DNA is important in the rational design of ligands that can bind to DNA with high affinity and selectivity. There are several methods to investigate interactions between drug and DNA. Some of them measure changing into DNA structures, such as lengthening and untwisting of helix of DNA. Other...
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The dispersive micro-solid phase extraction method for MS-based lipidomics of human breast milk*
PublicationA simple and rapid microextraction method ensuring high lipidome coverage was developed for liquid chromatography mass spectrometry (LC-MS)-based lipidomics of human breast milk. The dispersive microsolid phase extraction (D-µ-SPE) technique, coupled with the design of experiment (DoE) method, enabled the study of the influence of several conditions (desorption solvent, stationary phase ratio, and sorption and desorption time)...
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Understanding the early-stage release of volatile organic compounds from rapeseed oil during deep-frying of tubers by targeted and omics-inspired approaches using PTR-MS and gas chromatography
PublicationDuring deep-frying, a plethora of volatile products is emitted with the fumes. These compounds could act as oil quality indicators and change the indoor air composition leading to health risks for occupants. The presented experiments focus on deep-frying of different tubers in rapeseed oil at different frying temperatures. Here, two scenarios for real-time monitoring of volatile organic compounds (VOCs) using proton transfer reaction...
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Shaping the competence of future spatial policymakers for small- and medium-sized towns
PublicationIn this article, the authors aim to present issues addressed within the framework of the architecture and spatial development courses offered by the Faculty of Architecture at Gdańsk University of Technology (FA-GUT), Gdańsk, Poland. These issues concern competence in the education of future spatial planners and their readiness to deal with the development challenges facing small- and medium-sized towns. Within the article, the...
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The Importance of Demand and Environment for Defining and Establishing the Role of Data Stewards
PublicationData stewardship is now a central part of FAIR research data management. Although various types of positions called data stewards have been created at academic institutions over the last years, no demand-oriented, formal model of data stewardship and the associated roles exist so far. This workshop report presents the outcomes of the panel discussion “The Importance of Demand and Environment for Defining Data Stewardship” held...
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WPŁYW PARAMETRÓW PROCESU SBM NA DYSTRYBUCJĘ TWORZYWA W BUTELKACH PET – PRZEGLĄD LITERATURY
PublicationZ mechanicznego punktu widzenia profil grubości butelek PET jest uwarunkowany mechaniczno-cieplną odpowiedzią tworzywa rozdmuchiwanej preformy na zadane parametry procesu SBM. Z mikroskopowego punktu widzenia na mechaniczne i termiczne właściwości butelek CSD z PET największy wpływ mają procesy orientowania i krystalizowania tworzywa. Z technologicznego punkty widzenia profil grubości butelek PET po procesie produkcji metodą SBM...
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Sodium alginate decreases the permeability of intestinal mucus
PublicationIn the small intestine the nature of the environment leads to a highly heterogeneous mucus layer primarily composed of the MUC2 mucin. We set out to investigate whether the soluble dietary fibre sodium alginate could alter the permeability of the mucus layer. The alginate was shown to freely diffuse into the mucus and to have minimal effect on the bulk rheology when added at concentrations below 0.1%. Despite this lack of interaction...
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Processing of Satellite Data in the Cloud
PublicationThe dynamic development of digital technologies, especially those dedicated to devices generating large data streams, such as all kinds of measurement equipment (temperature and humidity sensors, cameras, radio-telescopes and satellites – Internet of Things) enables more in-depth analysis of the surrounding reality, including better understanding of various natural phenomenon, starting from atomic level reactions, through macroscopic...
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Improving Clairvoyant: reduction algorithm resilient to imbalanced process arrival patterns
PublicationThe Clairvoyant algorithm proposed in “A novel MPI reduction algorithm resilient to imbalances in process arrival times” was analyzed, commented and improved. The comments concern handling certain edge cases in the original pseudocode and description, i.e., adding another state of a process, improved cache friendliness more precise complexity estimations and some other issues improving the robustness of the algorithm implementation....
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Task Allocation and Scalability Evaluation for Real-Time Multimedia Processing in a Cluster Envirinment
PublicationAn allocation algorithm for stream processing tasks is proposed (Modified best Fit Descendent, MBFD). A comparison with another solution (BFD) is provided. Tests of the algorithms in an HPC environment are descrobed and the results are presented. A proper scalability metric is proposed and used for the evaluation of the allocation algorithm.
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Performance and Power-Aware Modeling of MPI Applications for Cluster Computing
PublicationThe paper presents modeling of performance and power consumption when running parallel applications on modern cluster-based systems. The model includes basic so-called blocks representing either computations or communication. The latter includes both point-to-point and collective communication. Real measurements were performed using MPI applications and routines run on three different clusters with both Infiniband and Gigabit Ethernet...
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Dobór usług WWW w środowisku SOA
PublicationPrzedstawiono nowy sposób doboru usług poprzez heurystyczną ocenęprzydatności ich atrybutów. Zaprezentowano algorytm doboru oraz siećneuronową jako sposób oceny wyboru pojedynczej usługi. Propozycjęzilustrowano na przykładzie usługi wysyłania wiadomości.
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Podstawowe metody integracji aplikacji trójwarstwowych
PublicationW niniejszym rozdziale przedstawiono klasyfikację metod integracji aplikacji trójwarstwowych. Opisano modele i sposoby rozwiązań dla każdej z typowych warstw: bazy danych, pośredniej i GUI oraz przykłady konkretnego ich wykorzystania wraz z diagramami sekwencji. Przeprowadzono analizę jakościową dla każdego z opisanych modeli, zaproponowano metryki dla parametrów jakościowych: modyfikowalności, spójności danych i wydajności wraz...
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KASKADA - multimedia processing platform architecture
PublicationPrzedstawiono architekturę platformy KASKADA (skrót od: Kontekstowa Analiza Strumieni Danych z Kamer do Aplikacji Definiujących Alarmy), będącą częścią projektu MAYDAY EURO 2012. Opisano nowy wielowarstwowy model przetwarzania strumieni multimedialnych. Zaproponowano następujące warstwy: usług - prostych i złożonych, zadań obliczeniowych i procesów. Przedstawiono przykładowy scenariusz wraz ze szczegółami jego wykonania, jak również...
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The task graph assignment for KASKADA platform
PublicationArtykuł opisuje model obliczeniowy wykorzystany w platformie KASKADA. Opiera się on na dwóch podstawowych elementach: węzłach klastra obliczeniowego oraz grafie zadań. Przeanalizowane zostały algorytmy przydzielania węzłów obliczeniowych dla zadań w zależności od kryteriów: minimalizacja fragmentacji klastra i minimalizacja opóźnienia przetwarzania danych. Zostały przedstawione wyniki symulacji opisanych algorytmów oraz ich...
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Przetwarzanie strumieni multimedialnych z użyciem klastra obliczeniowego
PublicationZaprezentowano docelową funkcjonalność platformy KASKADA oraz sposób konstrukcji kolejnych warstw. Przedstwiono metodę opisu zadań oraz metodę implementacji zadań uzytkowych (framework), których głównym celem jest analiza strumieni multimedialnych dla identyfikacji charakterystycznych obiektów (np. twarzy) oraz niebezpiecznych zdarzeń 9np. bójka0. Zaprezentowano również strategie wykonania tych zadań na komputerze klastrowym w...
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Real-Time Multimedia Stream data Processing in a Supercomputer Environment
PublicationRozdział opisuje doświadczenia uzyskane przez autorów podczas pracy w projekcie MAYDAY EURO 2012. Przedstawiono główny cel projektu - stworzenie systemu umożliwiającego rozwijanie i równolegle wykonywanie usług multimedialnych w środowisku klastra obliczeniowego dużej mocy. opisano tematykę przetwarzania dużej liczby strumieni multimedialnych na komputerach dużej mocy. Następnie zaprezentowano możliwości platformy KASKADA: tworzenie...
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Areas of updraft air motion from WRF model simulations.
Open Research DataPresented dataset is a part of numerical modelling study focusing on the analysis of sea ice floes size distribution (FSD) influence on the horizontal and vertical structure of convection in the atmosphere. The total area and spatial arrangement of the updrafts indicates that the FSD affects the total moisture content and the values of area averaged...
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Are stabilizing osmolytes preferentially excluded from the protein surface? FTIR and MD studies
PublicationInteractions between osmolytes and hen egg white lysozyme in aqueous solutions were studied by means of FTIR spectroscopy and molecular dynamics. A combination of difference spectra method and chemometric analysis of spectroscopic data was used to determine the number of osmolyte molecules interacting with the protein, and the preferential interaction coefficient in presented systems. Both osmolytes – L-proline and trimethylamine-N-oxide...
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Kosmiczne zastosowania zaawansowanych technologii informatycznych
e-Learning CoursesNowoczesne technologie wykorzystania systemów dużej mocy obliczeniowej: superkomputerów o architekturze klastrowej na przykładzie środowisk związanych z masowym przetwarzaniem danych (Big Data), obliczeniami w chmurze (Cloud Computing) oraz klasycznym podejściem wymiany wiadomości (MPI: Message Passing Interface) dla przetwarzania wsadowego.
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Bile conjugation and its effect on in vitro lipolysis of emulsions
PublicationBile Salts (BS) are responsible for stimulating lipid digestion in our organism. Gut microbiota are responsible for the deconjugation process of primary conjugated to secondary unconjugated BS. We use two structurally distinct BS and characterize the rate of lipolysis as a compound parameter. A static in-vitro digestion model as well as meta-analysis of literature data has been performed to determine the most influential factors...
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Jacek Rumiński prof. dr hab. inż.
PeopleWykształcenie i kariera zawodowa 2022 2016 2002 1995 1991-1995 Tytuł profesora Habilitacja Doktor nauk technicznych Magister inżynier Prezydent RP, dziedzina nauk inżynieryjno-technicznych, dyscyplina: inzyniera biomedyczna Politechnika Gdańska, Biocybernetyka i inżyniera biomedyczna, tematyka: „Metody wyodrębniania sygnałów i parametrów z różnomodalnych sekwencji obrazów dla potrzeb diagnostyki i wspomagania...
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Investigation of sweet substances of different molecular structure by potentiometric taste sensor with all solid state electrodes
PublicationA five channel potentiometric taste sensor consisting of an array of All Solid State Electrodes (ASSESs) with different lipid-polymer membranes has been developed. The electrodes are constructed of glassy carbon discs with electrochemically deposited poly(3,4-ethylenedioxythiophene) (PEDOT) acting as ion to electron transducer. The outer layer of the electrode is lipid-polymer membrane. Lipid substances immobilized in PVC membranes...
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Jacek Namieśnik prof. dr hab. inż.
PeopleScientific discipline: chemistryRector in 2016-2019 He was born on 10 December, 1949 in Mogilno. He graduated in 1972 at the Faculty of Chemistry at Gdańsk University of Technology, obtaining a master's degree in chemical engineering. In 1972 he started working at Gdańsk University of Technology, where in 1978 he defended his doctoral thesis and in 1985 he completed his habilitation. He was appointed an associate professor in 1991...
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Time fractional analysis of Casson fluid with application of novel hybrid fractional derivative operator
PublicationA new approach is used to investigate the analytical solutions of the mathematical fractional Casson fluid model that is described by the Constant Proportional Caputo fractional operator having non-local and singular kernel near an infinitely vertical plate. The phenomenon has been expressed in terms of partial differential equations, and the governing equations were then transformed in non-dimensional form. For the sake of generalized...
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Host and pathogen factors in Klebsiella pneumoniae upper urinary tract infections in renal transplant patients
PublicationPurpose . To analyse the role of virulence factors (VFs) and host in Klebsiella pneumoniae upper urinary tract infections (UTIs) in renal transplant (RTx) recipients. Methodology. Clinical and demographic data were registered prospectively. Phylogenetic background of K. pneumoniae isolates was analysed by PCR melting profiles (MP) and the following VFs genes: fimH-1, uge, kpn, ycfM, mrkD, rmpA, magA, hlyA, cnf-1, irp-1, irp-2,...
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A method to synthesise groove cam Geneva mechanisms with increased dwell period
PublicationThe present study develops a method to synthesise the groove cam Geneva mechanism with increased dwell period. The main condition of the synthesis is to provide the desired law of motion of the wheel. Additional synthesis conditions are the limitation of the maximum pressure angle and the limitation of the minimum curvature radius of the cam profile. Unlike the conventional Geneva mechanisms, the synthesised groove cam Geneva mechanisms...
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Magdalena Szuflita-Żurawska
PeopleHead of the Scientific and Technical Information Services at the Gdansk University of Technology Library and the Leader of the Open Science Competence Center. She is also a Plenipotentiary of the Rector of the Gdańsk University of Technology for open science. She is a PhD Candidate. Her main areas of research and interests include research productivity, motivation, management of HEs, Open Access, Open Research Data, information...
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Microencapsulation of fish oil – determination of optimal wall material and encapsulation methodology
PublicationFor the first time, we present a meta-analysis of experimental and literature data to determine which microencapsulation methodology, and which wall material are best suited to protect fish oil. Our analysis covered a period of several decades of research (1984–2018). The analysis was conducted on 196 literature data-points, and 16 data-points determined experimentally for this publication. PLS regression was used to determine...
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RDF dataset profiling - a survey of features, methods, vocabularies and applications
PublicationThe Web of Data, and in particular Linked Data, has seen tremendous growth over the past years. However, reuse and take-up of these rich data sources is often limited and focused on a few well-known and established RDF datasets. This can be partially attributed to the lack of reliable and up-to-date information about the characteristics of available datasets. While RDF datasets vary heavily with respect to the features related...
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Turbiny Parowe, Gazowe i Wodne
e-Learning CoursesPodstawy obiegów cieplnych turbin parowych (obieg Rankine'a, obiegi z regeneracją, obiegi z przegrzewem międzystopniowym, dobór parametrów i schematów obiegu). Podstawy obiegów cieplnych turbin gazowych (obieg Braytona, obiegi z regeneracją, chłodzeniem międzystopniowym, sekwencyjnymi komorami spalania, Ericssona, dobór parametrów projektowych). Teoria stopnia turbinowego (rozkład ciśnień na profilu, siły działające na profil,...
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Magdalena Popowska dr
PeopleMagdalena Popowska (PhD) is a researcher and lecturer of Organization Science and Entrepreneurship at the Faculty of Management and Economics of Gdansk University of Technology. For many years she has been in charge of exchange programmes, double degrees and other internationalization activities. In 2008-2016 she was a Vice-Dean for International and Public Affairs and now she is a Dean Proxy for International Cooperation. Her...
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Accuracy of Trajectory Tracking Based on Nonlinear Guidance Logic for Hydrographic Unmanned Surface Vessels
PublicationA new trend in recent years for hydrographic measurement in water bodies is the use of unmanned surface vehicles (USVs). In the process of navigation by USVs, it is particularly important to control position precisely on the measuring profile. Precise navigation with respect to the measuring profile avoids registration of redundant data and thus saves time and survey costs. This article addresses the issue of precise navigation...
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Adiponectin is unrelated to kidney function or injury markers in renal transplant recipients: A one-year follow-up study
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Radio Communication Antennas and MIMO Techniques (2023/24)
e-Learning CoursesCourse assigned to the following subject: - Radio Communication Antennas and MIMO Techniques (profile Radio Communication Systems and Networks [EN])
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Scheduling for Industrial Control Traffic Using Massive MIMO and Large Intelligent Surfaces
PublicationIndustry 4.0, with its focus on flexibility and customizability, is pushing in the direction of wireless communication in future smart factories, in particular massive multiple-input multiple-output (MIMO), and its future evolution Large Intelligent Surfaces (LIS), which provide more reliable channel quality than previous technologies. As such, there arises the need to perform efficient scheduling of industrial control traffic...
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Ryszard Strzelecki prof. dr hab. inż.
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Non-enzymatic glutathione-mediated conjugation of unsymmetrical bisacridine C-2028 with anticancer activity
Open Research DataThe presented data complement the studies on the interplay between C-2028 (anticancer-active unsymmetrical bisacridine) and the glutathione S-transferase/glutathione (GST/GSH) system.
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Video recordings of bees at entrance to hives
Open Research DataVideo recordings of bees at entrance to hives from 2017-04-22, 2017-04-23 and 2018-05-22. All recordings were made using hand-held full HD camera (Samsung Galaxy S3) and encoded using H.264 video codec (Standard Baseline Profile for mov files from 2017, High Profile for mp4 files from 2018) , 30 FPS and bit rate 14478 kb/s (mov files from 2017) or 16869 kb/s...
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Comparison of Average Energy Slope Estimation Formulas for One-dimensional Steady Gradually Varied Flow
PublicationTo find the steady flow water surface profile, it is possible to use Bernoulli’s equation, which is a discrete form of the differential energy equation. Such an approach requires the average energy slope between cross-sections to be estimated. In the literature, many methods are proposed for estimating the average energy slope in this case, such as the arithmetic mean, resulting in the standard step method, the harmonic mean and...
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The occurrence of polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) in the chosen area of Svalbard
PublicationIn the recent years, scientists have been paying more attention to the impact of compounds of anthropogenic origin on the environment. Polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) are both groups of stable organic compounds, difficult to biodegrade, and potentially toxic. Because of their affinity to lipids, they can accumulate in fat tissue and exert influence on animal health. This paper present...