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Search results for: PEPTIDE TRANSPORTERS
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Recent Developments in Data-Assisted Modeling of Flexible Proteins
PublicationMany proteins can fold into well-defined conformations. However, intrinsically-disordered proteins (IDPs) do not possess a defined structure. Moreover, folded multi-domain proteins often digress into alternative conformations. Collectively, the conformational dynamics enables these proteins to fulfill specific functions. Thus, most experimental observables are averaged over the conformations that constitute an ensemble. In this...
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Financial aspects of supporting Ukrainian refugees
PublicationWarfare in Ukraine meant that in 2022 many countries, including Poland and other European, focused mainly on helping refugees from Ukraine and humanitarian transports. The assistance took on various forms - from basic humanitarian support, through in-kind help, financial and military assistance. Poland launched its humanitarian aid in the first days of the conflict. The aid provided by each country varies. It should be noted, however,...
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Novel Functionalization of Boron-Doped Diamond by Microwave Pulsed-Plasma Polymerized Allylamine Film
PublicationWe report the novel modification of a hydrogen-terminated polycrystalline boron-doped electrode with a microwave pulsed-plasma polymerized allylamine. Boron-doped diamond (BDD) was coated with a very thin layer of adherent cross-linked, pinhole- and additive-free allylamine plasma polymer (PPAAm) resistant to hydrolysis and delamination and characterized by a high density of positively charged amino groups. The pulsed microwave...
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Targeting yeast topoisomerase II by imidazo and triazoloacridinone derivatives resulting in their antifungal activity
PublicationFungal pathogens are considered as serious factors for deadly diseases and are a case of medical concern. Invasive fungal infections also complicate the clinical course of COVID-19, leading to a significant increase in mortality. Furthermore, fungal strains' multidrug resistance has increased the demand for antifungals with a different mechanism of action. The present study aimed to identify antifungal compounds targeting yeast...
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Zastosowanie bakteriocyn - peptydów o aktywności bakteriobójczej
PublicationBakteriocyny są to peptydy bakteriobójcze produkowane przez wiele rodzajów bakterii w celu eliminacji ze środowiska bakterii innych rodzajów lub konkurowania z nimi. Cechą charakterystyczną tych peptydów jest to, że są one syntetyzowane na rybosomach. Mogą być modyfikowane potranslacyjnie lub nie. W chwili obecnej bakteriocyny stosowane są w przemyśle spożywczym jako dodatek do produktów żywnościowych, jednak ich potencjał aplikacyjny...
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Antifungal activity of thionated analogues of nva-fmdp and lys-nva-fmdp
Publicationotrzymano dwa peptydy w których wiązanie amidowe łączące aminokwasy zamieniono na tioamidowe w wyniku kilkunastoetapowej syntezy chemicznej. do reakcji tionowania zastosowano odczynnik lawessona. otrzymane związki poddano badaniom aktywności z wykorzystaniem pięciu szczepów candida , w tym szczepów opornych na flukonazol. stwierdzono, ze obecniość wiązania tioamidowego znacznie obniża aktywność przeciwgrzybową testowanych związków...
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Niebiałkowe związki azotowe
PublicationNiebiałkowe związki azotowe powstają w żywności wskutek enzymatycznych prze-mian różnych substratów zawierających w swym składzie azot. Są wśród nichprzede wszystkim aminokwasy, peptydy, nukleotydy, tlenek trimetyloaminy orazaminy i ich pochodne. Wywierają one korzystny lub niepożądany wpływ na smak,zapach i barwę żywności, mogą służyć jako wskaźniki świeżości, lub mogą byćspożywane w nadmiernych ilościach, wywierać działanie...
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Management of seaport critical infrastructures of integrated sea-land transport chains
PublicationW morsko-lądowych łańcuchach transportowych logistyczne procesy integracyjne przebiegają pomiędzy trzema podstawowymi ogniwami: żeglugą morską, portami morskimi i transportem zaplecza. W tym ujęciu morsko-lądowe łańcuchy transportowe, które stanowią przestrzenno-czasową kombinację lądowych i morskich ogniw transportowych, stają się także najwyższą formą integracji portów i żeglugi z innymi gałęziami transportu, wymagającą stałego...
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Uwarunkowania realizacji kontrapasa autobusowego w zmiennokierunkowej organizacji ruchu
PublicationPolskie miasta wprowadzają rozwiązania mające na celu zachęcanie do korzystania z alternatywnych do podróży samochodem sposobów przemieszczania się, w tym transportem zbiorowym, co może przyczynić się do zmniejszenia zatłoczenia sieci ulicznej. Jednym z przykładów takich działań jest wprowadzenie dedykowanego zmiennokierunkowego pasa autobusowego na jednej z głównych arterii miasta Gdyni. Jest to pierwsze rozwiązanie w Polsce,...
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Citropin 1.1 Trifluoroacetate to Chloride Counter-Ion Exchange in HCl-Saturated Organic Solutions: An Alternative Approach
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Ageing-Time Dependent Changes of Angiotensin I-Converting Enzyme-Inhibiting Activity of Protein Hydrolysates Obtained from Dry-Cured Pork Loins Inoculated with Probiotic Lactic Acid Bacteria
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An Overview of Bidirectional EV Chargers: Empowering Traction Grid-Powered Chargers
PublicationIn recent years, the number of electric vehicles has been at least doubling year after year. As a result, today electric vehicles already account for approximately 10% of the global automotive market, which positively affects environment in urbanized areas. However, to take full advantage of the EV integration it is necessary to use renewable sources for their charging; optimally place charging stations/terminals; optimally manage...
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Romanika Okraszewska dr inż. arch.
PeopleRomanika Okraszewska, Ph.D., Eng. Arch., is an Assistant Professor at the Faculty of Civil and Environmental Engineering of Gdańsk University of Technology (GUT). Graduated from the mathematical and informatical class at the National Education Commission High School in Gdańsk. Graduated from two faculties of Gdańsk University of Technology, Architecture and Urban Planning (2002) and Management and Economics (2004). Participant...
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Grzegorz Rotta dr inż.
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Hazardous material-related propagation of the effects of train accidents in the subgrade
PublicationA large part of the transport of hazardous materials is carried out by rail. Therefore, the security of these transports is becoming increasingly important. Every catastrophe involving dangerous materials has a negative impact on the participants of the incident and the surrounding environment, because its range is generally not local. It follows that in the event of a catastrophe, its effects should be minimized and remediation...
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Imidazoacridinone-dependent lysosomal photodestruction: a pharmacological Trojan horse approach to eradicate multidrug-resistant cancers
PublicationMultidrug resistance (MDR) remains a primary hindrance to curative cancer therapy. Thus, introduction of novel strategies to overcome MDR is of paramount therapeutic significance. Sequestration of chemotherapeutics in lysosomes is an established mechanism of drug resistance. Here, we show that MDR cells display a marked increase in lysosome number. We further demonstrate that imidazoacridinones (IAs), which are cytotoxic fluorochromes,...
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A cryptic ribosome binding site, false signals in reporter systems and avoidance of protein translation chaos
PublicationThe expression of reporter gene may be induced by activation of cryptic signalling sequences, as we found while constructing the mutS-lacZ fusion gene. We cloned the Escherichia coli lacZ gene encoding beta-galactosidase into a plasmid vector carrying the Thermus thermophilus mutS gene. The clones expected to produce beta-galactosidase as the C-terminal fusion were selected for the complementation of beta-galactosidase activity...
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Lodowa kraina - obszar badań dla chemika analityka. Cz. 1 - Badania z zakresu chemii analitycznej prowadzone na terenie Antarktyki
PublicationPomimo, że Antarktyka jest kontynentem wolnym od przejawów antropopresji związanej z różnymi sferami działalności człowieka dane literaturowe mogą być podstawą do stwierdzenia, że nie jest to obszar wolny od zanieczyszczeń antropogenicznych. Zanieczyszczenia, które są identyfikowane w różnych elementach środowiska Antarktyki związane są głównie z ich transportem na duże odległości oraz depozycją na tym obszarze. W pracy przedstawiono:...
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Wpływ produkcji butelek z tworzyw sztucznych na środowisko naturalne. Cz. I. Zastosowanie metody oceny ReCiPe 2016 w celu identyfikacji problemów środowiskowych
PublicationDokonano oceny wpływu opakowań na środowisko naturalne. Głównym celem było przeprowadzenie analizy cyklu życia (LCA) butelki do napojów wykonanej z poli(tereftalanu etylenu) (PET). Za jednostkę funkcjonalną przyjęto łącznie 1000 szt. butelek PET o pojemności 1 L. Granica przyjętego systemu obejmowała kroki od momentu dostarczenia preform do zakładu produkcyjnego aż do ich prawidłowego ukształtowania w procesie produkcyjnym. Z systemu...
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Design and distribution of air nozzles in the biomass boiler assembly
PublicationDue to energy crisis as well as increasing pollution of the environment, renewable energy sources usage increases all over the world. These facts encouraged authors to start research over developing a uniform biomass boiler calculation model. This paper presents a design of biomass boiler assembly created for ORC (Organic Rankine Cycle) unit since these systems could achieve strong position in energy industry....
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PLANOWANIE BEZPIECZNYCH I „ZIELONYCH” SYSTEMÓW KOMUNIKACYJNYCH
PublicationIn order to achieve balanced forms of urban infrastructure, which ensure comfort, safety and spatial order, when designing new solutions it is necessary to adopt a multi-facet approach which will combine everything that the local residents need but will respond harmoniously to the existing cultural landscape. It is therefore necessary to work out complex undertakings for the sake of planning and developing urban space. Coherent...
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Antimicrobial molecular nanocarrier–drug conjugates
PublicationMany antimicrobial drugs are poorly active against pathogenic microbes causing intracellular infections, such as Mycobacterium tuberculosis or Plasmodium falciparum. On the other hand, several known antimicrobial agents are not effective enough because of their limited cellular penetration. A common feature of both challenges is the inability of an active agent to cross the biological membrane(s). One of the possible approaches...
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Specific Binding of Cholesterol to the Amyloid Precursor Protein: Structure of the Complex and Driving Forces Characterized in Molecular Detail
PublicationC99 is the C-terminal membrane-bound fragment of the amyloid precursor protein that is cleaved by γ-secretase to release Aβ peptides, the hallmark of Alzheimer’s disease (AD). Specific interactions of C99 with cholesterol have been proposed to underlie the recognized role of cholesterol in promoting amyloidogenesis. By using molecular dynamics simulations, we studied cholesterol binding to C99 in a lipid bilayer. We determined...
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Synthesis of amides under microwave irradiation
PublicationAmides belong to the most important carboxylic acid derivatives. They are constituents of natural compounds like peptides and proteins. They found applications in many branches of science and industry, especially in pharmaceutical and polymer science. Conventional procedures for amide preparation involve reaction between amine and carboxylic acid or their more active derivatives such as acid chlorides, acid anhydrides or esters....
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Biowaste chicken eggshell powder as a potential cure modifier for epoxy/anhydride systems: competitiveness with terpolymer-modified calcium carbonate at low loading levels
PublicationBiowaste chicken eggshell (ES) powder was applied as a potential cure modifier in epoxy/anhydride systems. Cure behaviour and kinetics of composites filled with very low content (0.1 wt% based on epoxy resin) of ES, calcium carbonate (CaCO3), and terpolymer-modified fillers, mES and mCaCO3, were discussed comparatively. Surface analysis was performed by X-ray photoelectron spectroscopy. Cure kinetics was investigated by differential...
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Effect of Nanohydroxyapatite on Silk Fibroin–Chitosan Interactions—Molecular Dynamics Study
PublicationFibroin–chitosan composites, especially those containing nanohydroxyapatite, show potential for bone tissue regeneration. The physicochemical properties of these biocomposites depend on the compatibility between their components. In this study, the intermolecular interactions of fibroin and chitosan were analyzed using a molecular dynamics approach. Two types of systems were investigated: one containing acetic acid and the other...
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THE STUDY OF WATER POLLUTION OF THE LOWER VISTULA RIVER BY PLASTIC PARTICLES
PublicationSince the beginning of widespread use of plastic its consumption and production has been constantly increasing. As a result of human activity part of waste ends up in our environment and is deposited in each of the elements of the biosphere. These impurities can be in the form of large elements, small particles fragmented to macroscopic level (pellets, facial scrub grains) and the microparticles visible under a microscope. Particularly...
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Niebiałkowe związki azotowe. Rozdział 8
PublicationAzot związków niebiałkowych stanowi od kilku do kilkudziesięciu procent ogólnej ilości azotu w różnych surowcach żywnościowych. Wskutek enzymatycznych i chemicznych przemian w czasie przechowywania i przetwarzania zmienia się udział i skład tych związków. Niebiałkowe związki azotowe uczestniczą w tworzeniu zapachu i smaku produktów żywnościowych, niektóre z nich, np. histamina są szkodliwe dla zdrowia, inne np N-nitrozoaminy lub...
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Concentration and sources of polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) in surface soil near a municipal solid waste (MSW) landfill
PublicationDue to a continuous demand of land for infrastructural and residential development there is a public concern about the condition of surface soil near municipal solid waste landfills. A total of 12 surface (0–20 cm) soil samples from a territory near a landfill were collected and the concentration of 16 PAHs and 7 PCB congeners were investigated in these samples. Limits of detection were in the range of 0.038–1.2 μg/kg for PAHs...
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Towards improved energy efficiency of future smart ships by application of advanced CFD simulations – case study
PublicationThe international trade plays crucial role in today’s globally developed world’s economy. Many people are unaware of the unimaginable volume of cargo being transported every year by oceans and seas. For most of the time invisible from land the shipping industry preserves its strong position of the most cost-efficient and environmental friendly mean of transport. However during last years the shipping industry is under great pressure...
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Determination of ionic conductivity in the Bi-Si-O and Pb-Si-O glasses
PublicationImpedance spectroscopy measurements in various gas atmospheres were carried out in order to explain the doubts about the type of carriers and the mechanism of electrical conductivity in Bi-Si-O and Pb-Si-O glasses. In bismuth silicate glass, a typical ionic conductivity with oxygen ions as charge carriers was observed. The level of electrical conductivity of the glass at 400 °C was 5 × 10−8 S·cm−1 , with the activation energy of...
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Analiza przyczyn zużywania się (uszkadzania) szyn w zależności od warunków techniczno – eksploatacyjnych toru
PublicationDiagnostyka nawierzchni kolejowej jest istotnym elementem składowym czynników wpływających na poprawę stanu technicznego infrastruktury kolejowej w Polsce. Monitorowanie zmian zachodzących na powierzchni tocznej szyn jest bardzo ważnym elementem w kontekście poziomu bezpieczeństwa przewozów prowadzonych transportem szynowym. W artykule przedstawiono niektóre z czynników wpływające na proces degradacji powierzchni tocznej szyn w...
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Wielopoziomowe modelowanie ruchu - koncepcja i doświadczenia praktyczne
PublicationDoświadczenia z ostatnich lat na obszarze województwa pomorskiego wskazują, że na obszarze województwa pomorskiego stosowane są różne narzędzia prognozowania i analiz transportowych. Stosowane modele są niekompatybilne, opracowywane przy innych założeniach i co najgorzej produkowane prognozy i wyniki analiz znacznie różnią się między sobą. Biorą to pod uwagę Katedra Inżynierii Drogowej Politechniki Gdańskiej wyszła z inicjatywą...
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Modelling and Analysis of the Positioning Accuracy in the Loading Systems of Mobile Cranes
PublicationIn this work, the authors analyse the influence of the order and range of sequential movements of a crane's working members on the accuracy of the final cargo positioning. The analysis was conducted on the basis of a specially developed method in which the authors proposed the introduction of a geometrical indicator of positioning the load in the intermediate positions (after completing each movement sequence) and in the target...
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Human carnosinases: A brief history, medicinal relevance, and in silico analyses
PublicationCarnosine, an endogenous dipeptide, has been found to have a plethora of medicinal properties, such as antioxidant, antiageing, and chelating effects, but with one downside: a short half-life. Carnosinases and two hydrolytic enzymes, which remain enigmatic, are responsible for these features. Hence, here we emphasize why research is valuable for better understanding crucial concepts like ageing, neurodegradation, and cancerogenesis,...
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Anharmonic Infrared Spectroscopy through the Fourier Transform of Time Correlation Function Formalism in ONETEP
PublicationDensity functional theory molecular dynamics (DFT-MD) provides an efficient framework for accurately computing several types of spectra. The major benefit of DFTMD approaches lies in the ability to naturally take into account the effects of temperature and anharmonicity, without having to introduce any ad hoc or a posteriori corrections. Consequently, computational spectroscopy based on DFT-MD approaches plays a pivotal role in...
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Silica In Silico: A Molecular Dynamics Characterization of the Early Stages of Protein Embedding for Atom Probe Tomography
PublicationA novel procedure for the application of atom probe tomography (APT) to the structural analysis of biological systems, has been recently proposed, whereby the specimen is embedded by a silica matrix and ablated by a pulsed laser source. Such a technique, requires that the silica primer be properly inert and bio-compatible, keeping the native structural features of the system at hand, while condensing into an amorphous, glass-like...
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A vector-enzymatic DNA fragment amplification-expression technology for construction of artificial, concatemeric DNA, RNA and proteins for novel biomaterials, biomedical and industrial applications
PublicationA DNA fragment amplification/expression technology for the production of new generation biomaterials for scientific, industrial and biomedical applications is described. The technology enables the formation of artificial Open Reading Frames (ORFs) encoding concatemeric RNAs and proteins. It recruits the Type IIS SapI restriction endonuclease (REase) for an assembling of DNA fragments in an ordered head-to-tail-orientation. The...
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Enhanced susceptibility to antifungal oligopeptides in yeast strains overexpressing ABC multidrug efflux pumps
PublicationPorównano podatność na działanie związków przeciwgrzybowych o strukturze oligopeptydowej oraz aminokwasowej szczepów Saccharomyces cerevisiae z usuniętymi genami kodującymi białka oporności wielolekowej oraz transformantów tych szczepów, zawierających geny CDR1, CDR2 lub MDR1, kodujące główne pompy wielolekowe Candida albicans. Rekombinowane szczepy nadprodukujące białka Cdr1p i Cdr2p wykazywały zwiększoną wrażliwość na wszystkie...
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Propagation Characteristics of Partial Discharges in an Oil-Filled Power Transformer
PublicationPower transformers are among the most important assets in the power transmission and distribution grid. However, they suffer from degradation and possible faults causing major electrical and financial losses. Partial discharges (PDs) are used to identify the insulation health status and their degradation level. PDs are incipient, low-magnitude faults caused by localized dielectric breakdown. Those activities emit signals in many...
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Effective Permeability of Multi Air Gap Ferrite Core 3-Phase Medium Frequency Transformer in Isolated DC-DC Converters
PublicationThe magnetizing inductance of the medium frequency transformer (MFT) impacts the performance of the isolated dc-dc power converters. The ferrite material is considered for high power transformers but it requires an assembly of type “I” cores resulting in a multi air gap structure of the magnetic core. The authors claim that the multiple air gaps are randomly distributed and that the average air gap length is unpredictable at the...
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Disaster-Resilient Routing Schemes for Regional Failures
PublicationLarge-scale natural disasters can have a profound effect on the telecommunication services in the affected geographical area. Hence, it is important to develop routing approaches that may help in circumventing damaged regional areas of a network. This prompted the development of geographically diverse routing schemes and also of disaster-risk aware routing schemes. A minimum-cost geodiverse routing, where a minimum geographical...
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TRANSPORT ZANIECZYSZCZEŃ, ZT; PG_00042395
e-Learning CoursesProgram studiów obejmuje zajęcia z transportu zanieczyszczeń w wymiarze: 15 godzin wykładów, 15 godzin projektu/seminarium. Przedmiot może być zaliczony po osiągnięciu wszystkich efektów kształcenia przewidzianych przewodnikiem dydaktycznym (sylabusem). W trakcie semestru w obrębie przedmiotu student zapozna się z zagadnieniami związanymi z transportem, migracją zanieczyszczeń.
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Proces realizacji działań dotyczących miejskiego transportu ładunków
PublicationW artykule przedstawiono strukturę proces zarządzania realizacją działań dotyczących miejskiego transportu ładunków. Proces obejmuje etapy planowania, organizacji, realizacji i kontroli, przy czym szczególną uwagę poświęcono etapowi planowania. Jest to spowodowane zidentyfikowanymi na bazie doświadczeń zagranicznych problemami w praktycznej identyfikacji problemów związanych transportem ładunków poprzez podmioty odpowiedzialne...
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|Analiza zmian funkcjonowania transportu zbiorowego wynikających z budowy węzłów integracyjnych
PublicationCoraz częstszym problemem zauważalnym podczas modernizacji lub przebudowy sieci transportowej miasta jest integrowanie środków transportu. Rozwiązaniem tej sytuacji jest budowa węzłów przesiadkowych umożliwiających lepszy dostęp do transportu publicznego. Niesie to za sobą skutki w postaci modyfikacji funkcjonowania linii transportu zbiorowego, co daje możliwość poszerzenia oferty przewozowej oraz efektywnego wykorzystania potencjału...
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Organic Pollution in Surface Waters from the Fuglebekken Basin in Svalbard, Norwegian Arctic
PublicationThe Fuglebekken basin is situated in the southern part of the island of Spitsbergen (Norwegian Arctic), on the Hornsund fjord (Wedel Jarlsberg Land). Surface water was collected from 24 tributaries (B1-B24) and from the main stream water in the Fuglebekken basin (25) between 10 July 2009 and 30 July 2009. The present investigation reveals the results of the analysis of these samples for their PAH and PCB content. Twelve of 16 PAHs...
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A novel dual-band rectifier circuit with enhanced bandwidth for RF energy harvesting applications
PublicationIn recent years, a rapid development of low-power sensor networks, enabling machine-to-machine communication in applications such as environmental monitoring, has been observed. Contemporary sensors are normally supplied by an external power source, typically in a form of a battery, which limits their lifespan and increases the maintenance costs. This problem can be addressed by harvesting and converting ambient RF energy into...
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Selection of C-Type Filters for Reactive Power Compensation and Filtration of Higher Harmonics Injected into the Transmission System by Arc Furnaces
PublicationThis article presents a method for selecting the elements of a C-type filter working with a conventional LC-type filter for compensating reactive power and filtering out higher harmonics generated by arc furnaces and ladle furnaces. The study was conducted in a steel mill supplied by a 110 kV transmission system, where higher harmonic currents and nonlinear loads were measured. A series of computer simulations were performed under...
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Multi-transformer primary-side regulated flyback converter for supplying isolated IGBT and MOSFET drivers
PublicationThis paper presents primary-side voltage regulated multi-transformer quasi-resonant flyback converter (MTFC) for supplying isolated power switch drivers. The proposed topology offers distinct advantages over frequently used flyback converter possessing one high frequency transformer with isolated multiple outputs. Particularly, when a large number of separate dc supply units is required, then MTFC enables improved regular distribution...
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Cytocompatibility of stabilized black phosphorus nanosheets tailored by directly conjugated polymeric micelles for human breast cancer therapy
PublicationThe novel procedure of few-layer black phosphorus (FLBP) stabilization and functionalisation was here proposed. The cationic polymer PLL and non-ionic PEG have been involved into encapsulation of FLBP to allow sufficient time for further nanofabrication process and overcome environmental degradation. Two different spacer chemistry was designed to bind polymers to tumor-homing peptides. The efficiency of functionalisation was examined...