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Search results for: PHYLOGENETIC TREE COMPARISON
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Study of Multi-Class Classification Algorithms’ Performance on Highly Imbalanced Network Intrusion Datasets
PublicationThis paper is devoted to the problem of class imbalance in machine learning, focusing on the intrusion detection of rare classes in computer networks. The problem of class imbalance occurs when one class heavily outnumbers examples from the other classes. In this paper, we are particularly interested in classifiers, as pattern recognition and anomaly detection could be solved as a classification problem. As still a major part of...
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Measurement of Latency in the Android Audio Path
PublicationThis paper provides a description of experimental investigations concerning comparison between the audio path characteristics of various Android versions. First, information about the changes in each system version in the context of latency caused by them is presented. Then, a measurement procedure employing available applications to measure latency is described comparing to results contained in the Internet. Finally, a comparison...
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Biochemistry - Laboratory exercises - Nowy
e-Learning CoursesExerise 1. The ability to accumulate metal cations by edible mushrooms, comparison with edible plants Exercise 2. Measurement of activity of glutathione S-transferases - the detoxifying enzymes present in the cytosol of eukaryotic cells Exercise 3. Cell membranes permeability Exercise 4. Detection of mutagenic substances using Ames test Exercise 5. Gluten content in food products part 1. Exercise 6. Gluten content in food...
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Biochemistry - Laboratory exercises
e-Learning CoursesExerise 1. The ability to accumulate metal cations by edible mushrooms, comparison with edible plants Exercise 2. Measurement of activity of glutathione S-transferases - the detoxifying enzymes present in the cytosol of eukaryotic cells Exercise 3. Cell membranes permeability Exercise 4. Detection of mutagenic substances using Ames test Exercise 5. Gluten content in food products part 1. Exercise 6. Gluten content in food...
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The role of analytical chemistry in the study of the Anthropocene
PublicationThe term “Anthropocene” refers to not yet formalized epoch of geologic time during which geologic processes have been dominated by the human impact. This impact takes on many forms. Biological, physical and chemical changes to the Earth System caused by anthropogenic activity are recorded in natural archives either as new fossil assemblages (neobiota), anthropogenic deposits or a wide variety of pollutants emitted to the environment....
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DBpedia and YAGO Based System for Answering Questions in Natural Language
PublicationIn this paper we propose a method for answering class 1 and class 2 questions (out of 5 classes defined by Moldovan for TREC conference) based on DBpedia and YAGO. Our method is based on generating dependency trees for the query. In the dependency tree we look for paths leading from the root to the named entity of interest. These paths (referenced further as fibers) are candidates for representation of actual user intention. The...
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Process arrival pattern aware algorithms for acceleration of scatter and gather operations
PublicationImbalanced process arrival patterns (PAPs) are ubiquitous in many parallel and distributed systems, especially in HPC ones. The collective operations, e.g. in MPI, are designed for equal process arrival times (PATs), and are not optimized for deviations in their appearance. We propose eight new PAP-aware algorithms for the scatter and gather operations. They are binomial or linear tree adaptations introducing additional process...
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Collision-free network exploration
PublicationMobile agents start at different nodes of an n-node network. The agents synchronously move along the network edges in a collision-free way, i.e., in no round two agents may occupy the same node. An agent has no knowledge of the number and initial positions of other agents. We are looking for the shortest time required to reach a configuration in which each agent has visited all nodes and returned to its starting location. In...
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The design of an intelligent medical space supporting automated patient interviewing
PublicationThe article presents the architecture and results of implementing an application for the intelligent medical space UbiDoDo (Ubiquitous Domestic Doctor's Office). The main purpose of the application is real-time monitoring of the biomedical parameters of a patient in his domestic environment. It allows an immediate reaction to appearing symptoms and provides means to automatically interview the patient and deliver his results to...
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NLP Questions Answering Using DBpedia and YAGO
PublicationIn this paper, we present results of employing DBpedia and YAGO as lexical databases for answering questions formulated in the natural language. The proposed solution has been evaluated for answering class 1 and class 2 questions (out of 5 classes defined by Moldovan for TREC conference). Our method uses dependency trees generated from the user query. The trees are browsed for paths leading from the root of the tree to the question...
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Impact of surface skin temperature change on blood flow characteristics in palm
PublicationHeating a human palm during 3 minutes period causes changes in superficial skin temperature and leads to thermoregulation system response. The response time and level of flow characteristics change depend on the subject hand size and health of his vascular tree. A solution of Pennes bioheat propagation model was analyzed in order to see how much heat has to be transferred into the tissue to extort the observable reaction. The reflective...
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On the Limiting Distribution of Lempel-Ziv’78 Redundancy for Memoryless Sources
PublicationWe study the Lempel-Ziv'78 algorithm and show that its (normalized) redundancy rate tends to a Gaussian distribution for memoryless sources. We accomplish it by extending findings from our 1995 paper, in particular, by presenting a new simplified proof of the central limit theorem (CLT) for the number of phrases in the LZ'78 algorithm. We first analyze the asymptotic behavior of the total path length in the associated digital search...
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Domination subdivision and domination multisubdivision numbers of graphs
PublicationThe domination subdivision number sd(G) of a graph G is the minimum number of edges that must be subdivided (where an edge can be subdivided at most once) in order to increase the domination number of G. It has been shown [10] that sd(T)<=3 for any tree T. We prove that the decision problem of the domination subdivision number is NP-complete even for bipartite graphs. For this reason we define the domination multisubdivision number...
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Nagranie formy muzycznej w systemie stereofonii dookólnej
PublicationCelem pracy była realizacja nagrania kwintetu jazzowego w wybranych systemach stereofonii wielokanałowej. Dodatkowym celem było przeprowadzenie testów subiektywnych zrealizowanych nagrań. W pracy zawarto w pierwszej kolejności zagadnienia związane z przestrzenną lokalizacją źródeł dźwięku przez człowieka. W dalszej części przywołane zostały wybrane techniki mikrofonowe stereofonii wielokanałowej, a także metody prowadzenia testów...
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Toward Human Chromosome Knowledge Engine
PublicationHuman chromosomes carry genetic information about our life. Chromosome classification is crucial for karyotype analysis. Existing chromosome classification methods do not take into account reasoning, such as: analyzing the relationship between variables, modeling uncertainty, and performing causal reasoning. In this paper, we introduce a knowledge engine for reasoning-based human chromosome classification that stores knowledge...
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Geo-Questionnaire for Environmental Planning: The Case of Ecosystem Services Delivered by Trees in Poland
PublicationStudies on society and the environment interface are often based on simple questionnaires that do not allow for an in-depth analysis. Research conducted with geo-questionnaires is an increasingly common method. However, even if data collected via a geo-questionnaire are available, the shared databases provide limited information due to personal data protection. In the article, we present open databases that overcome those limitations....
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Intercomparison of TEC obtained from the IRI model to the one derived from GPS measurements
PublicationIRI (International Reference Ionosphere) is a well-known standard of the ionosphere, but nowadays GPS permanent observations are also the base of the regional and global ionosphere models. In this paper, comparison of TEC (Total Electron Content) derived from the IRI model to the global TEC parameters derived from GPS measurements is presented. Global TEC maps show, that GPS derived ionosphere models, in opposition to the IRI,...
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Characterisation of Escherichia coli isolates from the blood of haematological adult patients with bacteraemia: translocation from gut to blood requires the cooperation of multiple virulence factors
PublicationThe aim of the study was to investigate whether there are unique pathotypes of Escherichia coli capable of transmission from the gastrointestinal tract to the vascular bed. The study included E. coli strains isolated from clinical materials collected from 115 patients suffering from haematologic malignancies diagnosed with bacteraemia. The genotyping techniques established that 89 E. coli isolates from the blood had the same genotype...
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Whole-genome sequencing and antimicrobial potential of bacteria isolated from Polish honey
PublicationThe aim of this study was the whole-genome analysis and assessment of the antimicrobial potential of bacterial isolates from honey harvested in one geographical location—the north of Poland. In total, 132 strains were derived from three honey samples, and the antimicrobial activity of CFAM (cell-free after-culture medium) was used as a criterion for strain selection and detailed genomic investigation. Two of the tested isolates...
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Numerical simulation of the influence of the selected factors on the performance of a concrete road barrier H2/W5/B
PublicationThis paper discuss the influence of selected factors on the performance of a concrete road barrier H2/W5/B. Modelling techniques of a concrete road safety system were briefly discussed. Comparison to the full scale crash test results has been shown. The concrete road safety barrier has been investigated for evaluation of the overall damage after collision under various initial conditions. The failure assessment criterion has been...
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The loop impedance measurement
Open Research DataThe loop impedance measurement
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Time versus space trade-offs for randezvous in trees
PublicationTwo identical (anonymous) mobile agents start from arbitrary nodes of an unknown tree and have to meet at some node. Agents move in synchronous rounds: in each round an agent can either stay at the current node or move to one of its neighbors. We consider deterministic algorithms for this rendezvous task. The main result of this paper is a tight trade-off between the optimal time of completing rendezvous and the size of memory...
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The Use of Artificial Neural Networks and Decision Trees to Predict the Degree of Odor Nuisance of Post-Digestion Sludge in the Sewage Treatment Plant Process
PublicationThis paper presents the application of artificial neural networks and decision trees for the prediction of odor properties of post-fermentation sludge from a biological-mechanical wastewater treatment plant. The input parameters were concentrations of popular compounds present in the sludge, such as toluene, p-xylene, and p-cresol, and process parameters including the concentration of volatile fatty acids, pH, and alkalinity in...
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COVID-19 severity forecast based on machine learning and complete blood count data
PublicationProper triage of COVID-19 patients is a key factor in eective case management, especially with limited and insucient resources. In this paper, we propose a machine-aided diagnostic system to predict how badly a patient with COVID-19 will develop disease. The prognosis of this type is based on the parameters of commonly used complete blood count tests, which makes it possible to obtain data from a wide range of patients.We chose...
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COVID-19 severity forecast based on machine learning and complete blood count data
PublicationProper triage of COVID-19 patients is a key factor in eective case management, especially with limited and insucient resources. In this paper, we propose a machine-aided diagnostic system to predict how badly a patient with COVID-19 will develop disease. The prognosis of this type is based on the parameters of commonly used complete blood count tests, which makes it possible to obtain data from a wide range of patients.We chose...
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Thermal-Hydraulic Studies on the Shell-and-Tube Heat Exchanger with Minijets
PublicationIn this paper a patented design of a heat exchanger with minijets, with a cylindrical construction is presented. It is followed by the results of its systematic experimental investigations in the single-phase convection heat transfer mode. Based on these results, validation of selected correlations (coming from the literature) describing the Nusselt number was carried out. An assessment of the heat exchange intensification level...
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Approximate and analytic flow models for leak detection and identification
PublicationThe article presents a comprehensive quantitative comparison of four analytical models that, in different ways, describe the flow process in transmission pipelines necessary in the task of detecting and isolating leaks. First, the analyzed models are briefly presented. Then, a novel model comparison framework was introduced along with a methodology for generating data and assessing diagnostic effectiveness. The study presents basic...
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Road Restraint Systems as a Basis for Roadside Safety Improvement
PublicationRoadside-related crashes occur when vehicles run off the road. The majority of the crashes have severe outcomes, especially when an object is hit (tree, pole, supports, front wall of a culvert, barrier). These accidents represent app. 19% of all of Poland's road deaths. Roadside crashes involve: hitting a tree, hitting a barrier, hitting a sign or utility pole, vehicle roll-over on the roadside, vehicle roll-over on a slope and...
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Porównanie możliwości przesyłowych dwóch układów regulacyjnych: transformatorów z regulacją poprzeczną oraz transformatorów z regulacją wzdłużną
PublicationW artykule przedstawiono porównanie możliwości regulacyjnych transformatorów z regulacją poprzeczną oraz wzdłużną w wybranym węźle systemu elektroenergetycznego. Zaprezentowano możliwości regulacyjne tych układów oraz możliwości kształtowania wymiany międzysystemowej.
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Studies on the building typology, Kartuzy case study, March 2020
Open Research DataThe data presents results of work within the studies on the building typology, Kartuzy case study, study proposal from March 2020. The goal of the process was to identify the basic types of urban structure of the area and to analyse them in terms of location, connections with the neighbourhood, basic and social functions, population density, building...
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Studies on the building typology, Dolny Sopot district case study, March 2020
Open Research DataThe data presents results of work within the studies on the building typology, Dolny Sopot district case study, study proposal from March 2020. The goal of the process was to identify the basic types of urban structure of the area and to analyse them in terms of location, connections with the neighbourhood, basic and social functions, population density,...
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Studies on the building typology, Gdańsk-Przymorze Małe district case study, March 2020
Open Research DataThe data presents results of work within the studies on the building typology, Gdańsk-Przymorze Małe district case study, study proposal from March 2020. The goal of the process was to identify the basic types of urban structure of the area and to analyse them in terms of location, connections with the neighbourhood, basic and social functions, population...
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Studies on the building typology, Gdańsk-Oliwa district case study, March 2020
Open Research DataThe data presents results of work within the studies on the building typology, Gdańsk-Stara Oliwa district case study, study proposal from March 2020. The goal of the process was to identify the basic types of urban structure of the area and to analyse them in terms of location, connections with the neighbourhood, basic and social functions, population...
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Studies on the building typology, Gdańsk-Brzeźno district case study, March 2020
Open Research DataThe data presents results of work within the studies on the building typology, Gdańsk-Brzeźno district case study, study proposal from March 2020. The goal of the process was to identify the basic types of urban structure of the area and to analyse them in terms of location, connections with the neighbourhood, basic and social functions, population...
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Experimental Validation of Numerical Model within a Flow Configuration of the Model Kaplan Turbine
PublicationThis paper investigates validation of flow within a model Kaplan turbine. This includes comparison of various turbulence models and their influence on torque and power generated by the turbine. Numerical results were compared with experimental data.
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Novel analytical method for detection of orange juice adulteration based on ultra-fast gas chromatography
PublicationThe food authenticity assessment is an increasingly important issue in food quality and safety. The application of an electronic nose based on ultra-fast gas chromatography technique enables rapid analysis of the volatile compounds from food samples. Due to the fact that this technique provides chemical profiling of natural products, it can be a powerful tool for authentication in combination with chemometrics. In this article,...
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2-bondage in graphs
PublicationA 2-dominating set of a graph G=(V,E) is a set D of vertices of G such that every vertex of V(G)D has at least two neighbors in D. The 2-domination number of a graph G, denoted by gamma_2(G), is the minimum cardinality of a 2-dominating set of G. The 2-bondage number of G, denoted by b_2(G), is the minimum cardinality among all sets of edges E' subseteq E such that gamma_2(G-E') > gamma_2(G). If for every E' subseteq E we have...
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Parity vertex colouring of graphs
PublicationA parity path in a vertex colouring of a graph is a path along which each colour is used an even number of times. Let Xp(G) be the least number of colours in a proper vertex colouring of G having no parity path. It is proved that for any graph G we have the following tight bounds X(G) <= Xp(G) <=|V(G)|− a(G)+1, where X(G) and a(G) are the chromatic number and the independence number of G, respectively. The bounds are improved for...
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The computational complexity of the backbone coloring problem for bounded-degree graphs with connected backbones
PublicationGiven a graph G, a spanning subgraph H of G and an integer λ>=2, a λ-backbone coloring of G with backbone H is a vertex coloring of G using colors 1, 2, ..., in which the color difference between vertices adjacent in H is greater than or equal to lambda. The backbone coloring problem is to find such a coloring with maximum color that does not exceed a given limit k. In this paper, we study the backbone coloring problem for bounded-degree...
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Employing flowgraphs for forward route reconstruction in video surveillance system
PublicationPawlak’s flowgraphs were utilized as a base idea and knowledge container for prediction and decision making algorithms applied to experimental video surveillance system. The system is used for tracking people inside buildings in order to obtain information about their appearance and movement. The fields of view of the cameras did not overlap. Therefore, when an object was moving through unsupervised areas, prediction was needed...
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Shell model of multiple-row moment I-section end-plate joint
PublicationThe paper deals with a problem of application of shell elements in the models of multiple-row moment end-plate connections. The extended connection of I-section with a cross-section W760x265x220 made of steel S355 was analyzed. Comparison analysis of FEM, complex volume and shell models has been done. Three cases with different end-plate thickness: 14, 18 and 36 mm were analyzed and compared with the reference results. Comparison...
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Comparative Analysis of Numerical and Experimental Studies of the Airflow Around the Sample of Urban Development
PublicationIn this paper, on the background of a short overview of the recent advances in the field of Environmental Wind Engineering (EWE), a comparison of wind tunnel experiment and numerical simulation for some cases of airflow around an urban layout have been reported. The purpose of the study is quantitative and qualitative comparison of measurements in the wind tunnel as well as numerical simulation using Ansys Fluent software. The...
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Algorytmy wykrywania krawędzi w obrazie
PublicationWykrywanie krawędzi jest pierwszym etapem w cyfrowym przetwarzaniu obrazów. Operacja ta polega na usunięciu informacji takich jak kolor czy też jasność, a pozostawieniu jedynie krawędzi. Efektem tej operacji jest znaczna redukcja ilości danych do dalszej analizy. Pozwala to na zastosowanie w następnych etapach bardziej złożonych algorytmów rozpoznawania obiektów na podstawie kształtu. W artykule zaprezentowano zastosowanie algorytmów...
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Genetic Background and Antibiotic Resistance Profiles of K. pneumoniae NDM-1 Strains Isolated from UTI, ABU, and the GI Tract, from One Hospital in Poland, in Relation to Strains Nationally and Worldwide
PublicationIn recent years, there has been an observed increase in infections caused by carbapenem-resistant Klebsiella pneumonia (Kp) strains. The aim of this study was the phenotypic and genotypic analysis of eight K. pneumoniae NDM (Kp NDM) isolates, recovered in Poland during the years 2016 and 2018 from seven patients with urinary tract infections (UTIs), asymptomatic bacteriuria (ABU), or colonization of the gut. PCR melting profile...
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The reduction of vibrations in circular sawing machines
PublicationThe presented in this paper the main objectives of the research were to explore vibrations signals of the main spindle system, the machine tool body and a circular saw to extract informative features for assessment of the designs of the panel saw Fx3 and its follower Fx550.Even though the main spindle of the new table sliding saw Fx550 has its rotational speeds larger about 20% in comparison to the Fx3, peak values of the vibrational...
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Analysis of High Resolution Clouds of Points as a Source of Biometric Data
PublicationThe article presents the analysis devoted to human face data obtained by means of precise photographic scanners. Collected point clouds were used to make high precision meshes of human face. The essence of these studies is the comparison of relative features as well as the comparison of absolute models which require as precisely as possible matching of face models. The article focuses on the analysis of various parts of the human...
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An Evaluation Engine for Dynamic Ranking of Cloud Providers
PublicationThe paper focuses on creation of an effective dynamic ranking service for IaaS, PaaS and SaaS cloud providers. It considers building a quality model for this purpose along with definition of quality measure- ment procedures. The paper discusses several techniques known from already existing price comparison engines that could be modified and adopted for comparison of cloud providers. A technique for filtering measured data is proposed,...
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Problems of construction projects regarding historic road bridges
PublicationThe paper describe the comparison of different approaches to reconstruction and the problems in the selection of implementation for a historic bridge over the Vistula River in Tczew. A compromise reconstruction is shown, taking technical, historical and aesthetic aspects into account, as well as needs of the local community.
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Volatile composition of raw spirits of different botanical origin
PublicationThe paper presents the results of determination of the volatile composition of raw spirits, on the basis of trace compound isolation from their volatile fraction, and the comparison of the obtained volatile profiles of agricultural distillates of different botanical origins (maize, wheat, triticale, rye).
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Studies on the building typology, Gdańsk-Nowy Port district case study, March 2020
Open Research DataThe data presents results of work within the studies on the building typology, Gdańsk-Stary Nowy Port district case study, study proposal from March 2020. The goal of the process was to identify the basic types of urban structure of the area and to analyse them in terms of location, connections with the neighbourhood, basic and social functions, population...